How to Know What’s Up With Your Hormones (The Big 3)

When a woman experiences irregular periods, infertility, or other hormonal symptoms, it can be challenging to determine the underlying cause. Three common conditions—Hypothalamic Amenorrhea (HA), Polycystic Ovary Syndrome (PCOS), and Perimenopause—often share similar symptoms, including menstrual irregularities, weight gain, and changes in mood. However, each of these conditions has distinct underlying causes, and understanding the differences is essential for effective diagnosis and treatment. In this blog post, we’ll explore how to differentiate between these three conditions, the role of lab testing, and how thyroid imbalances can influence all of them.

Hypothalamic Amenorrhea (HA): The Stress-Induced Hormonal Disruption

Hypothalamic Amenorrhea (HA) is a condition in which the hypothalamus, a region of the brain responsible for regulating the menstrual cycle, reduces or stops its production of gonadotropin-releasing hormone (GnRH). This suppression leads to a cascade of hormonal imbalances that prevent ovulation and menstruation.

Causes of HA

The most common causes of HA are stress, over-exercising, and under-eating, often seen in athletes, individuals with eating disorders, or those experiencing significant emotional or physical stress. Other factors like chronic illness or weight fluctuations can also contribute to HA. Unlike PCOS or perimenopause, HA is a functional condition caused by the hypothalamus’ inability to signal the pituitary gland to release hormones necessary for ovulation.

Key Symptoms of HA:

  • Absence of periods (Amenorrhea)
  • Low energy or fatigue
  • Decreased libido
  • Weight loss or difficulty maintaining weight
  • Anxiety and stress-related symptoms

Lab Tests for HA:

To diagnose HA, several lab tests can help rule out other conditions. Common tests include:

  • Day 21 Progesterone: This test measures progesterone levels approximately one week after ovulation (on or around day 21 of the menstrual cycle). In HA, progesterone levels will likely be low or undetectable because ovulation isn’t occurring.
  • FSH (Follicle Stimulating Hormone): FSH levels in HA are typically low, reflecting the body’s lack of stimulation from GnRH.
  • LH (Luteinizing Hormone): Similarly, LH levels are also low in HA due to the lack of ovulation.
  • Estradiol: This estrogen-related hormone will also be low in HA, as the ovarian follicles are not developing properly due to the absence of stimulation from FSH and LH.

Thyroid Imbalances and HA:

Thyroid dysfunction, particularly hypothyroidism, can exacerbate or mimic HA symptoms, such as fatigue and irregular periods. If thyroid levels are off, it may further disrupt the menstrual cycle, complicating the diagnosis. For instance, low thyroid function can lower metabolism, leading to weight gain and worsening symptoms of HA.

Polycystic Ovary Syndrome (PCOS): The Hormonal Imbalance Disorder

Polycystic Ovary Syndrome (PCOS) is a common endocrine disorder that affects about 10% of women of reproductive age. PCOS is characterized by hormonal imbalances, particularly elevated levels of testosterone, and insulin resistance. Unlike HA, PCOS is not caused by stress or under-eating but is largely driven by genetic and metabolic factors.

Causes of PCOS:

The exact cause of PCOS remains unclear, but it is often linked to insulin resistance, which leads to an overproduction of androgens (male hormones) by the ovaries. This hormonal imbalance interferes with normal ovulation, causing irregular menstrual cycles, infertility, and the development of cysts on the ovaries.

Key Symptoms of PCOS:

  • Irregular or absent periods
  • Excessive hair growth (hirsutism) on the face, chest, or abdomen
  • Acne or oily skin
  • Thinning hair or scalp hair loss
  • Weight gain or difficulty losing weight
  • Infertility due to anovulation (lack of ovulation)

Lab Tests for PCOS:

Several lab tests are essential for diagnosing PCOS. These include:

  • Day 3 Estradiol: Estradiol levels on day 3 (a marker of ovarian function) are often normal or slightly elevated in women with PCOS. The increased estradiol may be due to the immature follicles present in the ovaries.
  • LH (Luteinizing Hormone): In PCOS, LH is often elevated, particularly in relation to FSH, contributing to the lack of ovulation. This imbalance can disrupt the normal menstrual cycle.
  • FSH (Follicle Stimulating Hormone): FSH levels in PCOS are typically lower than expected for the phase of the menstrual cycle, due to the high LH-to-FSH ratio.
  • Free and Total Testosterone: Elevated levels of testosterone (both free and total) are a hallmark of PCOS. High testosterone levels lead to symptoms like excess hair growth (hirsutism), acne, and scalp hair thinning.
  • Insulin and Glucose: Insulin resistance is common in PCOS, so measuring insulin levels or conducting a glucose tolerance test may also be necessary.

Thyroid Imbalances and PCOS:

Hypothyroidism can also exacerbate PCOS symptoms, particularly weight gain, fatigue, and irregular menstrual cycles. Low thyroid function can worsen insulin resistance, a key feature of PCOS, leading to further metabolic dysfunction. It is important to check TSH (Thyroid Stimulating Hormone), Free T3, and Free T4 to ensure thyroid health is optimized alongside PCOS management.

Perimenopause: The Transition to Menopause

Perimenopause refers to the transitional period leading up to menopause, typically occurring in women in their late 40s and early 50s. During this phase, estrogen and progesterone levels fluctuate, and ovarian function declines, leading to irregular periods and other symptoms related to hormonal imbalance.

Causes of Perimenopause:

Perimenopause occurs as a natural part of aging and is driven by changes in ovarian function. As the ovaries produce less estrogen and progesterone, women may experience symptoms such as hot flashes, night sweats, vaginal dryness, and mood swings. Perimenopause can last anywhere from 4 to 10 years before the final menstrual period (menopause) is reached.

Key Symptoms of Perimenopause:

  • Irregular periods or skipped cycles
  • Hot flashes and night sweats
  • Sleep disturbances
  • Mood swings or irritability
  • Decreased libido
  • Vaginal dryness and discomfort during intercourse
  • Fatigue and weight gain

Lab Tests for Perimenopause:

Several tests can help differentiate perimenopause from other conditions:

  • Day 21 Progesterone: In perimenopause, progesterone levels can fluctuate dramatically. Low progesterone levels, especially when coupled with low estradiol, can indicate the transition to menopause.
  • FSH (Follicle Stimulating Hormone): Elevated FSH levels can indicate ovarian insufficiency and the approach of menopause. In perimenopausal women, FSH levels may increase, as the ovaries become less responsive to stimulation.
  • Estradiol: Estradiol levels in perimenopausal women tend to be erratic and fluctuate, contributing to symptoms like hot flashes and irregular periods.
  • Free and Total Testosterone: Testosterone levels may increase in perimenopause due to a relative decline in estrogen, which can lead to symptoms like hair thinning or acne.

Thyroid Imbalances and Perimenopause:

Thyroid dysfunction is often confused with perimenopausal symptoms. Both conditions can present with fatigue, weight gain, irregular periods, and mood disturbances. Thyroid dysfunction, particularly hypothyroidism, can mimic perimenopausal symptoms, making it essential to evaluate thyroid function during this transitional period. TSH, Free T3, and Free T4 should be checked to rule out thyroid problems.

Differentiating between Hypothalamic Amenorrhea (HA), PCOS, and Perimenopause requires a careful evaluation of symptoms, lab tests, and clinical history. While these conditions share overlapping symptoms, such as menstrual irregularities, weight changes, and fatigue, they have distinct causes that require tailored treatment approaches.

Testing for key hormones such as Day 21 progesterone, FSH, LH, estradiol, and testosterone can provide critical insights into the root cause of symptoms. Additionally, assessing thyroid function through TSH, Free T3, and Free T4 is crucial, as thyroid imbalances can complicate or mimic these conditions.

Proper diagnosis and treatment are essential for managing these hormonal disorders and improving overall quality of life. If you’re experiencing symptoms of HA, PCOS, or perimenopause, consult with a healthcare provider to undergo the necessary testing and receive the most effective treatment plan.

Don’t miss out! Join the email list.

Love this post? Share it!

Want more? Check out my new guidebook, The Hormone Hacker!

I’m Dr. Alexandra MacKillop, a functional medicine physician, food scientist and nutrition expert.

I specialize in women’s health & hormones, addressing concerns like fertility, PCOS, endometriosis, dysmenorrhea (painful periods), PMS symptoms like bloating and mood changes and more.

If you’re looking for a new way to approach your health, I’m here to help you through it. Click to learn more.

Sources:

  1. Goodarzi, M. O., et al. (2011). “The genetics of polycystic ovary syndrome.” Nature Clinical Practice Endocrinology & Metabolism, 4